bmkmanu


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2022-08-25
Published by bmkmanu at 2022-08-25
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Bmk_Space_mapping.R Operating Instructions

1. Open the script file source(‘xxx’) #’xxx’ is the script path, for example ’C:/Users/R/Desktop/qq.R’ 2. Create a Seurat object and plot the spatial cluster map FilePath […]
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2022-08-03
Published by bmkmanu at 2022-08-03
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Cluster plot Software User Guide

Environment requirements R (Seurat, dplyr, tibble, ggplot2, getopt) Python3 (numpy, cv2, pandas, seaborn, sys, getopt) spots clustering Script: Seurat_for_bmkmanu_S1000.R Description: seurat_for_bmkmanu_S1000.R [-[-indir|i] <character>] [-[-resolution|r] <double>] [-[-MinCell|c] […]
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2022-08-03
Published by bmkmanu at 2022-08-03
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S1000 Seurat Analysis Pipeline

[su_heading size=”16″]Software Dependencies and Installation[/su_heading] python, version 3.8 or above. Download link:https://www.python.org/downloads/ Related modules: numpy, cv2, pandas, seaborn, sys, getopt R and RStudio installation. Download link:https://cran.r-project.org/ […]
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2022-07-15
Published by bmkmanu at 2022-07-15
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Animal Skin Single-Cell Demo Data

Sequencing read statistics Sequencing read statistics are shown in the table below: [su_table] Type Values Number of Reads 187088582 Valid Barcodes 162097865 Valid UMIs 175241433 [/su_table] […]
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2022-07-15
Published by bmkmanu at 2022-07-15
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BSCMatrix v1.9 Environment Setup and User Guide

V1.9 Update contents: 1. Adjusted the reads alignment strategy to improve the genome alignment rate; 2. Added the pipeline version number to the report; 3. Adjusted […]
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2022-06-21
Published by bmkmanu at 2022-06-21
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BMKManu DG1000 vs. Mainstream Overseas Single-Cell Platforms

BMKManu DG1000 and supporting consumables Single-cell sequencing has advanced rapidly since it was introduced, and the number of single-cell platforms has grown with it. On 25 […]
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2022-06-20
BMKMANU DG1000
Published by bmkmanu at 2022-06-20
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New Release | BMKManu DG1000 Single-Cell RNA Sequencing Arrives

The heterogeneity of gene expression and function among individual cells determines cell fate during development and is closely tied to the mechanisms of disease. Single-cell sequencing […]
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2022-06-08
Published by bmkmanu at 2022-06-08
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BSTViewer v3.0 Installation Tutorial

Procedure 1) Place the BSTViewer_project folder data downloaded from the official website (or the BSTViewer_project folder produced by running BSTMatrix) into a folder with an English-only […]
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2022-06-08
Published by bmkmanu at 2022-06-08
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BSTMatrix v2.3: R Environment Setup, Installation and User Guide

Generate Matrix 1.1 Software Environment Dependencies A)python: version 8 or above, with the cv2 module installed (4.0 or above), matplotlib, seaborn, pandas (1.5.0 or above), tifffile, […]
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